Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb1Q91XX8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Gm12441-201ENSMUST00000121806 588 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Gm4968-201ENSMUST00000071458 858 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb1Q91XX8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhgb1Q91XX8 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.52■□□□□ 0.71
Pcdhgb1Q91XX8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb1Q91XX8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 Gm6211-202ENSMUST00000167849 925 ntBASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 Gm5408-201ENSMUST00000197998 747 ntBASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhgb1Q91XX8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb1Q91XX8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb1Q91XX8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.47■□□□□ 0.71
Pcdhgb1Q91XX8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms