Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Mir7071-201ENSMUST00000184847 69 ntBASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chmp7Q8R1T1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Chmp7Q8R1T1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chmp7Q8R1T1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chmp7Q8R1T1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chmp7Q8R1T1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chmp7Q8R1T1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chmp7Q8R1T1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC24.14■■□□□ 1.46
Chmp7Q8R1T1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chmp7Q8R1T1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 Gm5540-201ENSMUST00000131852 1848 ntBASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chmp7Q8R1T1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Mir6982-201ENSMUST00000184354 68 ntBASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Gm10167-201ENSMUST00000150411 1479 ntBASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chmp7Q8R1T1 Gm21596-201ENSMUST00000178049 1316 ntBASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Chmp7Q8R1T1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Gm11249-201ENSMUST00000117071 859 ntBASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC24.11■■□□□ 1.45
Chmp7Q8R1T1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chmp7Q8R1T1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chmp7Q8R1T1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Gm2399-201ENSMUST00000104944 225 ntBASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Gm18666-201ENSMUST00000190039 958 ntBASIC24.08■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms