Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nudcd3Q8R1N4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nudcd3Q8R1N4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nudcd3Q8R1N4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nudcd3Q8R1N4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Nudcd3Q8R1N4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nudcd3Q8R1N4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nudcd3Q8R1N4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nudcd3Q8R1N4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nudcd3Q8R1N4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Gm5812-201ENSMUST00000061073 957 ntBASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nudcd3Q8R1N4 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Gm15546-201ENSMUST00000122095 826 ntBASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Gm9959-201ENSMUST00000068277 390 ntBASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nudcd3Q8R1N4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms