Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 Gm20049-201ENSMUST00000219950 730 ntBASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zcchc9Q8R1J3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zcchc9Q8R1J3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Gm13168-201ENSMUST00000121771 632 ntBASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zcchc9Q8R1J3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.71■□□□□ 0.59
Zcchc9Q8R1J3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Gm10252-201ENSMUST00000209541 832 ntBASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc9Q8R1J3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc9Q8R1J3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.68■□□□□ 0.58
Zcchc9Q8R1J3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Zcchc9Q8R1J3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms