Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Gm43183-201ENSMUST00000200632 547 ntBASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf2Q8CII9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf2Q8CII9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf2Q8CII9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf2Q8CII9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.25■□□□□ 0.83
Crlf2Q8CII9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.25■□□□□ 0.83
Crlf2Q8CII9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf2Q8CII9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf2Q8CII9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Gm18959-201ENSMUST00000208954 655 ntBASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf2Q8CII9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.23■□□□□ 0.83
Crlf2Q8CII9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf2Q8CII9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Gm11927-201ENSMUST00000118472 759 ntBASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Odf3b-204ENSMUST00000227834 930 ntBASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf2Q8CII9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Gm12382-201ENSMUST00000122005 922 ntBASIC20.21■□□□□ 0.83
Crlf2Q8CII9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf2Q8CII9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf2Q8CII9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.2■□□□□ 0.82
Crlf2Q8CII9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.2■□□□□ 0.82
Crlf2Q8CII9 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.2■□□□□ 0.82
Crlf2Q8CII9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf2Q8CII9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Crlf2Q8CII9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf2Q8CII9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf2Q8CII9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf2Q8CII9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Flg-201ENSMUST00000050758 1488 ntBASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Gm3375-201ENSMUST00000203929 796 ntBASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf2Q8CII9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.19■□□□□ 0.82
Crlf2Q8CII9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crlf2Q8CII9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Crlf2Q8CII9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Crlf2Q8CII9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms