Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clip4Q8CI96 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clip4Q8CI96 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Clip4Q8CI96 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.87■□□□□ 0.61
Clip4Q8CI96 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clip4Q8CI96 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clip4Q8CI96 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clip4Q8CI96 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.87■□□□□ 0.61
Clip4Q8CI96 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clip4Q8CI96 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.86■□□□□ 0.61
Clip4Q8CI96 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clip4Q8CI96 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 AA386476-201ENSMUST00000098781 1665 ntBASIC18.85■□□□□ 0.61
Clip4Q8CI96 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clip4Q8CI96 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.84■□□□□ 0.61
Clip4Q8CI96 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Gm27801-201ENSMUST00000184174 223 ntBASIC18.84■□□□□ 0.61
Clip4Q8CI96 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.84■□□□□ 0.61
Clip4Q8CI96 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.84■□□□□ 0.61
Clip4Q8CI96 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.84■□□□□ 0.61
Clip4Q8CI96 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip4Q8CI96 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Clip4Q8CI96 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clip4Q8CI96 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
Clip4Q8CI96 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clip4Q8CI96 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Clip4Q8CI96 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clip4Q8CI96 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.83■□□□□ 0.6
Clip4Q8CI96 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.83■□□□□ 0.6
Clip4Q8CI96 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Clip4Q8CI96 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clip4Q8CI96 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Clip4Q8CI96 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.83■□□□□ 0.6
Clip4Q8CI96 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip4Q8CI96 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip4Q8CI96 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip4Q8CI96 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.81■□□□□ 0.6
Clip4Q8CI96 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip4Q8CI96 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.81■□□□□ 0.6
Clip4Q8CI96 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip4Q8CI96 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip4Q8CI96 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip4Q8CI96 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Clip4Q8CI96 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.81■□□□□ 0.6
Clip4Q8CI96 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip4Q8CI96 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip4Q8CI96 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.81■□□□□ 0.6
Clip4Q8CI96 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip4Q8CI96 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms