Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim5Q8CI51 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Gm45417-201ENSMUST00000209533 758 ntBASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim5Q8CI51 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim5Q8CI51 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.29■□□□□ 0.36
Pdlim5Q8CI51 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim5Q8CI51 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Gm7860-201ENSMUST00000121190 879 ntBASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Gm26833-201ENSMUST00000180899 440 ntBASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim5Q8CI51 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim5Q8CI51 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim5Q8CI51 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim5Q8CI51 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim5Q8CI51 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim5Q8CI51 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms