Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb7Q8CDY9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb7Q8CDY9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb7Q8CDY9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb7Q8CDY9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.83■□□□□ 0.6
Pcdhb7Q8CDY9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb7Q8CDY9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdhb7Q8CDY9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdhb7Q8CDY9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb7Q8CDY9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb7Q8CDY9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb7Q8CDY9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Pcdhb7Q8CDY9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb7Q8CDY9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb7Q8CDY9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Pcdhb7Q8CDY9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb7Q8CDY9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb7Q8CDY9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms