Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm27454-201ENSMUST00000185090 204 ntBASIC16.66■□□□□ 0.26
SprnQ8BWU1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SprnQ8BWU1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SprnQ8BWU1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SprnQ8BWU1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SprnQ8BWU1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SprnQ8BWU1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SprnQ8BWU1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.66■□□□□ 0.26
SprnQ8BWU1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SprnQ8BWU1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SprnQ8BWU1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SprnQ8BWU1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SprnQ8BWU1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SprnQ8BWU1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SprnQ8BWU1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SprnQ8BWU1 Fst-202ENSMUST00000223640 2612 ntBASIC16.63■□□□□ 0.25
SprnQ8BWU1 Gm45417-201ENSMUST00000209533 758 ntBASIC16.63■□□□□ 0.25
SprnQ8BWU1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SprnQ8BWU1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SprnQ8BWU1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SprnQ8BWU1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SprnQ8BWU1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Gm12821-201ENSMUST00000120022 600 ntBASIC16.62■□□□□ 0.25
SprnQ8BWU1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SprnQ8BWU1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.61■□□□□ 0.25
SprnQ8BWU1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.61■□□□□ 0.25
SprnQ8BWU1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SprnQ8BWU1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.6■□□□□ 0.25
SprnQ8BWU1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SprnQ8BWU1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SprnQ8BWU1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.59■□□□□ 0.25
SprnQ8BWU1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms