Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trnp1Q80ZI1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trnp1Q80ZI1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trnp1Q80ZI1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trnp1Q80ZI1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trnp1Q80ZI1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trnp1Q80ZI1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trnp1Q80ZI1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trnp1Q80ZI1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trnp1Q80ZI1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trnp1Q80ZI1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trnp1Q80ZI1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trnp1Q80ZI1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trnp1Q80ZI1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnp1Q80ZI1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trnp1Q80ZI1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trnp1Q80ZI1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trnp1Q80ZI1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trnp1Q80ZI1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trnp1Q80ZI1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trnp1Q80ZI1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.39■■□□□ 1.01
Trnp1Q80ZI1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trnp1Q80ZI1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trnp1Q80ZI1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trnp1Q80ZI1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Gm21814-202ENSMUST00000203277 873 ntBASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trnp1Q80ZI1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trnp1Q80ZI1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnp1Q80ZI1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trnp1Q80ZI1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trnp1Q80ZI1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.35■■□□□ 1.01
Trnp1Q80ZI1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trnp1Q80ZI1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Trnp1Q80ZI1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.34■■□□□ 1.01
Trnp1Q80ZI1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms