Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pif1Q80SX8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pif1Q80SX8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pif1Q80SX8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pif1Q80SX8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pif1Q80SX8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pif1Q80SX8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pif1Q80SX8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pif1Q80SX8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pif1Q80SX8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.32■□□□□ 0.36
Pif1Q80SX8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pif1Q80SX8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pif1Q80SX8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.32■□□□□ 0.36
Pif1Q80SX8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pif1Q80SX8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pif1Q80SX8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pif1Q80SX8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.3■□□□□ 0.36
Pif1Q80SX8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pif1Q80SX8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.3■□□□□ 0.36
Pif1Q80SX8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pif1Q80SX8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Pif1Q80SX8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pif1Q80SX8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pif1Q80SX8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.29■□□□□ 0.36
Pif1Q80SX8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pif1Q80SX8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pif1Q80SX8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pif1Q80SX8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pif1Q80SX8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pif1Q80SX8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pif1Q80SX8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pif1Q80SX8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pif1Q80SX8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pif1Q80SX8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pif1Q80SX8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pif1Q80SX8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pif1Q80SX8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pif1Q80SX8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.27■□□□□ 0.35
Pif1Q80SX8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pif1Q80SX8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pif1Q80SX8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pif1Q80SX8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Pif1Q80SX8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pif1Q80SX8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pif1Q80SX8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pif1Q80SX8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pif1Q80SX8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.25■□□□□ 0.35
Pif1Q80SX8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pif1Q80SX8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pif1Q80SX8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pif1Q80SX8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms