Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rfx4Q7TNK1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx4Q7TNK1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Serp2-204ENSMUST00000228055 705 ntBASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx4Q7TNK1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
Rfx4Q7TNK1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Rfx4Q7TNK1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx4Q7TNK1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx4Q7TNK1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Rfx4Q7TNK1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx4Q7TNK1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx4Q7TNK1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx4Q7TNK1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx4Q7TNK1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx4Q7TNK1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx4Q7TNK1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Rfx4Q7TNK1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Gm8770-201ENSMUST00000121113 1109 ntBASIC18■□□□□ 0.47
Rfx4Q7TNK1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18■□□□□ 0.47
Rfx4Q7TNK1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Gm42922-201ENSMUST00000195887 2078 ntBASIC18■□□□□ 0.47
Rfx4Q7TNK1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx4Q7TNK1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx4Q7TNK1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx4Q7TNK1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms