Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn10aQ6QIY3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.65■■□□□ 1.06
Scn10aQ6QIY3 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.64■■□□□ 1.06
Scn10aQ6QIY3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scn10aQ6QIY3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scn10aQ6QIY3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scn10aQ6QIY3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.64■■□□□ 1.05
Scn10aQ6QIY3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Scn10aQ6QIY3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scn10aQ6QIY3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn10aQ6QIY3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.64■■□□□ 1.05
Scn10aQ6QIY3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scn10aQ6QIY3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn10aQ6QIY3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Scn10aQ6QIY3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.62■■□□□ 1.05
Scn10aQ6QIY3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn10aQ6QIY3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn10aQ6QIY3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn10aQ6QIY3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.62■■□□□ 1.05
Scn10aQ6QIY3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn10aQ6QIY3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn10aQ6QIY3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.61■■□□□ 1.05
Scn10aQ6QIY3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn10aQ6QIY3 Flg-201ENSMUST00000050758 1488 ntBASIC21.61■■□□□ 1.05
Scn10aQ6QIY3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scn10aQ6QIY3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn10aQ6QIY3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn10aQ6QIY3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Scn10aQ6QIY3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Scn10aQ6QIY3 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.6■■□□□ 1.05
Scn10aQ6QIY3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn10aQ6QIY3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn10aQ6QIY3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn10aQ6QIY3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn10aQ6QIY3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.6■■□□□ 1.05
Scn10aQ6QIY3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn10aQ6QIY3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scn10aQ6QIY3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.59■■□□□ 1.05
Scn10aQ6QIY3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scn10aQ6QIY3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scn10aQ6QIY3 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.59■■□□□ 1.05
Scn10aQ6QIY3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn10aQ6QIY3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Scn10aQ6QIY3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn10aQ6QIY3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn10aQ6QIY3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn10aQ6QIY3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Zfp783-201ENSMUST00000095946 670 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms