Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Dhx40Q6PE54 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dhx40Q6PE54 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dhx40Q6PE54 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dhx40Q6PE54 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Dhx40Q6PE54 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Dhx40Q6PE54 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Dhx40Q6PE54 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Dhx40Q6PE54 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Dhx40Q6PE54 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.89■□□□□ 0.93
Dhx40Q6PE54 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Dhx40Q6PE54 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dhx40Q6PE54 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Spcs1-204ENSMUST00000226782 949 ntBASIC20.87■□□□□ 0.93
Dhx40Q6PE54 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dhx40Q6PE54 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
Dhx40Q6PE54 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dhx40Q6PE54 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Dhx40Q6PE54 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.85■□□□□ 0.93
Dhx40Q6PE54 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.85■□□□□ 0.93
Dhx40Q6PE54 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dhx40Q6PE54 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dhx40Q6PE54 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dhx40Q6PE54 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Dhx40Q6PE54 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Dhx40Q6PE54 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Dhx40Q6PE54 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dhx40Q6PE54 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dhx40Q6PE54 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dhx40Q6PE54 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dhx40Q6PE54 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dhx40Q6PE54 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Dhx40Q6PE54 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dhx40Q6PE54 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Dhx40Q6PE54 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms