Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.79■□□□□ 0.92
Herc4Q6PAV2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc4Q6PAV2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc4Q6PAV2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc4Q6PAV2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Herc4Q6PAV2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc4Q6PAV2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Herc4Q6PAV2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc4Q6PAV2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc4Q6PAV2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.77■□□□□ 0.92
Herc4Q6PAV2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc4Q6PAV2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Herc4Q6PAV2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc4Q6PAV2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc4Q6PAV2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc4Q6PAV2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Gm5874-201ENSMUST00000096101 508 ntBASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.76■□□□□ 0.91
Herc4Q6PAV2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Gm13146-201ENSMUST00000118508 780 ntBASIC20.75■□□□□ 0.91
Herc4Q6PAV2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Herc4Q6PAV2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc4Q6PAV2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Herc4Q6PAV2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Gm42642-201ENSMUST00000200683 355 ntBASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc4Q6PAV2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Gm18284-201ENSMUST00000172604 624 ntBASIC20.71■□□□□ 0.91
Herc4Q6PAV2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Herc4Q6PAV2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms