Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Spcs1-204ENSMUST00000226782 949 ntBASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.22■□□□□ 0.35
Smarcd3Q6P9Z1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd3Q6P9Z1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Smarcd3Q6P9Z1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd3Q6P9Z1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Gm43137-201ENSMUST00000198052 594 ntBASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd3Q6P9Z1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd3Q6P9Z1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smarcd3Q6P9Z1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms