Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt39Q6IFX4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.78■□□□□ 0.92
Krt39Q6IFX4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.78■□□□□ 0.92
Krt39Q6IFX4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Krt39Q6IFX4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.77■□□□□ 0.92
Krt39Q6IFX4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Krt39Q6IFX4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt39Q6IFX4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt39Q6IFX4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.77■□□□□ 0.92
Krt39Q6IFX4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Krt39Q6IFX4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.77■□□□□ 0.92
Krt39Q6IFX4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Krt39Q6IFX4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Krt39Q6IFX4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt39Q6IFX4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt39Q6IFX4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt39Q6IFX4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt39Q6IFX4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.76■□□□□ 0.91
Krt39Q6IFX4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt39Q6IFX4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.76■□□□□ 0.91
Krt39Q6IFX4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt39Q6IFX4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.76■□□□□ 0.91
Krt39Q6IFX4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt39Q6IFX4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt39Q6IFX4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Gm45417-201ENSMUST00000209533 758 ntBASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt39Q6IFX4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt39Q6IFX4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Krt39Q6IFX4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt39Q6IFX4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms