Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h4Q60641 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h4Q60641 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Nr1h4Q60641 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h4Q60641 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h4Q60641 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nr1h4Q60641 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nr1h4Q60641 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Gm12922-201ENSMUST00000120626 809 ntBASIC17.89■□□□□ 0.45
Nr1h4Q60641 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h4Q60641 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.88■□□□□ 0.45
Nr1h4Q60641 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.88■□□□□ 0.45
Nr1h4Q60641 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.88■□□□□ 0.45
Nr1h4Q60641 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.87■□□□□ 0.45
Nr1h4Q60641 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.87■□□□□ 0.45
Nr1h4Q60641 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Rps24-207ENSMUST00000224568 714 ntBASIC17.86■□□□□ 0.45
Nr1h4Q60641 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h4Q60641 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Gm14117-201ENSMUST00000122417 843 ntBASIC17.85■□□□□ 0.45
Nr1h4Q60641 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nr1h4Q60641 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h4Q60641 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms