Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav3-1Q5R1I8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3-1Q5R1I8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Trav3-1Q5R1I8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav3-1Q5R1I8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-1Q5R1I8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-1Q5R1I8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-1Q5R1I8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-1Q5R1I8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms