Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scarf1Q5ND28 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Scarf1Q5ND28 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scarf1Q5ND28 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scarf1Q5ND28 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scarf1Q5ND28 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.64■□□□□ 0.89
Scarf1Q5ND28 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scarf1Q5ND28 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scarf1Q5ND28 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarf1Q5ND28 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scarf1Q5ND28 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scarf1Q5ND28 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Gm6365-201ENSMUST00000054711 744 ntBASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scarf1Q5ND28 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 BC021767-201ENSMUST00000126387 1716 ntBASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scarf1Q5ND28 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Scarf1Q5ND28 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.58■□□□□ 0.89
Scarf1Q5ND28 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scarf1Q5ND28 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scarf1Q5ND28 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scarf1Q5ND28 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Scarf1Q5ND28 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.58■□□□□ 0.89
Scarf1Q5ND28 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.58■□□□□ 0.89
Scarf1Q5ND28 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms