Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Fst-202ENSMUST00000223640 2612 ntBASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Mir6236-201ENSMUST00000184437 123 ntBASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clhc1Q5M6W3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clhc1Q5M6W3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clhc1Q5M6W3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Gm13241-201ENSMUST00000094493 780 ntBASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clhc1Q5M6W3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clhc1Q5M6W3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Clhc1Q5M6W3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clhc1Q5M6W3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clhc1Q5M6W3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.08■□□□□ 0.48
Clhc1Q5M6W3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clhc1Q5M6W3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clhc1Q5M6W3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clhc1Q5M6W3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clhc1Q5M6W3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Clhc1Q5M6W3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.06■□□□□ 0.48
Clhc1Q5M6W3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Clhc1Q5M6W3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms