Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Gm8495-201ENSMUST00000188740 694 ntBASIC20.54■□□□□ 0.88
Bbof1Q3V079 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Bbof1Q3V079 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Bbof1Q3V079 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Bbof1Q3V079 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.53■□□□□ 0.88
Bbof1Q3V079 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Bbof1Q3V079 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.53■□□□□ 0.88
Bbof1Q3V079 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.53■□□□□ 0.88
Bbof1Q3V079 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.53■□□□□ 0.88
Bbof1Q3V079 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.53■□□□□ 0.88
Bbof1Q3V079 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Bbof1Q3V079 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Bbof1Q3V079 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Bbof1Q3V079 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Bbof1Q3V079 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Bbof1Q3V079 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Bbof1Q3V079 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.51■□□□□ 0.87
Bbof1Q3V079 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.51■□□□□ 0.87
Bbof1Q3V079 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Gm9988-201ENSMUST00000069786 435 ntBASIC20.51■□□□□ 0.87
Bbof1Q3V079 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Bbof1Q3V079 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bbof1Q3V079 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Gm42778-201ENSMUST00000199644 553 ntBASIC20.49■□□□□ 0.87
Bbof1Q3V079 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Bbof1Q3V079 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Bbof1Q3V079 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Bbof1Q3V079 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Bbof1Q3V079 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Bbof1Q3V079 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.48■□□□□ 0.87
Bbof1Q3V079 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.48■□□□□ 0.87
Bbof1Q3V079 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Bbof1Q3V079 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Bbof1Q3V079 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms