Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Gm6576-201ENSMUST00000169678 883 ntBASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Upf3aQ3ULJ3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.85■□□□□ 0.77
Upf3aQ3ULJ3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf3aQ3ULJ3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.85■□□□□ 0.77
Upf3aQ3ULJ3 Gm18666-201ENSMUST00000190039 958 ntBASIC19.85■□□□□ 0.77
Upf3aQ3ULJ3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.85■□□□□ 0.77
Upf3aQ3ULJ3 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.85■□□□□ 0.77
Upf3aQ3ULJ3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf3aQ3ULJ3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.85■□□□□ 0.77
Upf3aQ3ULJ3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf3aQ3ULJ3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Gm2399-201ENSMUST00000104944 225 ntBASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.83■□□□□ 0.77
Upf3aQ3ULJ3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upf3aQ3ULJ3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upf3aQ3ULJ3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upf3aQ3ULJ3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upf3aQ3ULJ3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.83■□□□□ 0.76
Upf3aQ3ULJ3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Gm10698-201ENSMUST00000182663 604 ntBASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.82■□□□□ 0.76
Upf3aQ3ULJ3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf3aQ3ULJ3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf3aQ3ULJ3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf3aQ3ULJ3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms