Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Gm7860-201ENSMUST00000121190 879 ntBASIC17.72■□□□□ 0.43
Nkx3-2P97503 Mir5133-201ENSMUST00000174955 77 ntBASIC17.72■□□□□ 0.43
Nkx3-2P97503 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx3-2P97503 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Nkx3-2P97503 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.7■□□□□ 0.42
Nkx3-2P97503 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx3-2P97503 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nkx3-2P97503 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx3-2P97503 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx3-2P97503 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx3-2P97503 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx3-2P97503 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx3-2P97503 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx3-2P97503 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.68■□□□□ 0.42
Nkx3-2P97503 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nkx3-2P97503 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx3-2P97503 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx3-2P97503 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx3-2P97503 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx3-2P97503 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.65■□□□□ 0.42
Nkx3-2P97503 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx3-2P97503 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx3-2P97503 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
Nkx3-2P97503 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx3-2P97503 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nkx3-2P97503 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx3-2P97503 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Nkx3-2P97503 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms