Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm15565-201ENSMUST00000118890 427 ntBASIC17.95■□□□□ 0.46
Cdx2P43241 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdx2P43241 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdx2P43241 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdx2P43241 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdx2P43241 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdx2P43241 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdx2P43241 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdx2P43241 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdx2P43241 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdx2P43241 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.94■□□□□ 0.46
Cdx2P43241 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.94■□□□□ 0.46
Cdx2P43241 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdx2P43241 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cdx2P43241 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Cdx2P43241 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdx2P43241 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdx2P43241 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.93■□□□□ 0.46
Cdx2P43241 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdx2P43241 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdx2P43241 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cdx2P43241 Gm13158-201ENSMUST00000122007 736 ntBASIC17.93■□□□□ 0.46
Cdx2P43241 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdx2P43241 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.93■□□□□ 0.46
Cdx2P43241 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdx2P43241 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.93■□□□□ 0.46
Cdx2P43241 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cdx2P43241 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdx2P43241 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdx2P43241 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdx2P43241 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.92■□□□□ 0.46
Cdx2P43241 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdx2P43241 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cdx2P43241 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cdx2P43241 Gm37055-201ENSMUST00000191866 133 ntBASIC17.92■□□□□ 0.46
Cdx2P43241 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Cdx2P43241 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdx2P43241 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.92■□□□□ 0.46
Cdx2P43241 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdx2P43241 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdx2P43241 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 Mir1199-201ENSMUST00000117015 119 ntBASIC17.91■□□□□ 0.46
Cdx2P43241 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdx2P43241 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdx2P43241 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdx2P43241 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdx2P43241 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdx2P43241 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.9■□□□□ 0.46
Cdx2P43241 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cdx2P43241 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.9■□□□□ 0.46
Cdx2P43241 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.9■□□□□ 0.46
Cdx2P43241 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdx2P43241 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdx2P43241 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cdx2P43241 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cdx2P43241 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.9■□□□□ 0.46
Cdx2P43241 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.9■□□□□ 0.46
Cdx2P43241 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.89■□□□□ 0.45
Cdx2P43241 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.89■□□□□ 0.45
Cdx2P43241 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Cdx2P43241 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdx2P43241 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdx2P43241 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdx2P43241 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdx2P43241 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms