Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.53■□□□□ 0.72
Cxcl12P40224 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.53■□□□□ 0.72
Cxcl12P40224 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cxcl12P40224 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cxcl12P40224 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cxcl12P40224 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cxcl12P40224 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.52■□□□□ 0.72
Cxcl12P40224 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cxcl12P40224 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cxcl12P40224 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.52■□□□□ 0.72
Cxcl12P40224 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cxcl12P40224 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cxcl12P40224 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cxcl12P40224 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.51■□□□□ 0.71
Cxcl12P40224 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Cxcl12P40224 Gm11927-201ENSMUST00000118472 759 ntBASIC19.51■□□□□ 0.71
Cxcl12P40224 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cxcl12P40224 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cxcl12P40224 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cxcl12P40224 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cxcl12P40224 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cxcl12P40224 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Cxcl12P40224 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cxcl12P40224 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cxcl12P40224 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cxcl12P40224 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl12P40224 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl12P40224 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl12P40224 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl12P40224 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl12P40224 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.49■□□□□ 0.71
Cxcl12P40224 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.49■□□□□ 0.71
Cxcl12P40224 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cxcl12P40224 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cxcl12P40224 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.49■□□□□ 0.71
Cxcl12P40224 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cxcl12P40224 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.49■□□□□ 0.71
Cxcl12P40224 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cxcl12P40224 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cxcl12P40224 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cxcl12P40224 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cxcl12P40224 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Cxcl12P40224 Gm6659-201ENSMUST00000174752 547 ntBASIC19.48■□□□□ 0.71
Cxcl12P40224 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.48■□□□□ 0.71
Cxcl12P40224 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.48■□□□□ 0.71
Cxcl12P40224 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.48■□□□□ 0.71
Cxcl12P40224 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cxcl12P40224 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl12P40224 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cxcl12P40224 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl12P40224 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.47■□□□□ 0.71
Cxcl12P40224 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl12P40224 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl12P40224 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl12P40224 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cxcl12P40224 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.46■□□□□ 0.71
Cxcl12P40224 Gm21814-202ENSMUST00000203277 873 ntBASIC19.46■□□□□ 0.71
Cxcl12P40224 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.46■□□□□ 0.71
Cxcl12P40224 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cxcl12P40224 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Cxcl12P40224 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.45■□□□□ 0.7
Cxcl12P40224 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cxcl12P40224 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.45■□□□□ 0.7
Cxcl12P40224 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cxcl12P40224 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.45■□□□□ 0.7
Cxcl12P40224 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Cxcl12P40224 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms