Protein–RNA interactions for Protein: P15388

Kcnc1, Potassium voltage-gated channel subfamily C member 1, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnc1P15388 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Kcnc1P15388 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Kcnc1P15388 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Kcnc1P15388 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Kcnc1P15388 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Kcnc1P15388 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Kcnc1P15388 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Kcnc1P15388 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Kcnc1P15388 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Kcnc1P15388 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Kcnc1P15388 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Kcnc1P15388 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Kcnc1P15388 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.41■□□□□ 0.54
Kcnc1P15388 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcnc1P15388 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Kcnc1P15388 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.4■□□□□ 0.54
Kcnc1P15388 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.4■□□□□ 0.54
Kcnc1P15388 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Kcnc1P15388 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.4■□□□□ 0.54
Kcnc1P15388 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.4■□□□□ 0.54
Kcnc1P15388 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Kcnc1P15388 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Kcnc1P15388 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.4■□□□□ 0.54
Kcnc1P15388 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Kcnc1P15388 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.39■□□□□ 0.53
Kcnc1P15388 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Kcnc1P15388 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Kcnc1P15388 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnc1P15388 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.38■□□□□ 0.53
Kcnc1P15388 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.38■□□□□ 0.53
Kcnc1P15388 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.38■□□□□ 0.53
Kcnc1P15388 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Kcnc1P15388 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.38■□□□□ 0.53
Kcnc1P15388 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnc1P15388 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.37■□□□□ 0.53
Kcnc1P15388 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnc1P15388 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnc1P15388 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnc1P15388 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnc1P15388 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnc1P15388 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.36■□□□□ 0.53
Kcnc1P15388 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.36■□□□□ 0.53
Kcnc1P15388 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnc1P15388 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms