Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RaraP11416 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.35■□□□□ 0.85
RaraP11416 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RaraP11416 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RaraP11416 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RaraP11416 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RaraP11416 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RaraP11416 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.35■□□□□ 0.85
RaraP11416 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RaraP11416 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
RaraP11416 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RaraP11416 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.34■□□□□ 0.85
RaraP11416 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RaraP11416 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RaraP11416 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RaraP11416 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RaraP11416 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RaraP11416 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RaraP11416 Gm27454-201ENSMUST00000185090 204 ntBASIC20.33■□□□□ 0.85
RaraP11416 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.33■□□□□ 0.85
RaraP11416 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.33■□□□□ 0.85
RaraP11416 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RaraP11416 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RaraP11416 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RaraP11416 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.33■□□□□ 0.84
RaraP11416 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RaraP11416 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RaraP11416 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RaraP11416 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RaraP11416 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RaraP11416 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RaraP11416 Gm27801-201ENSMUST00000184174 223 ntBASIC20.32■□□□□ 0.84
RaraP11416 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RaraP11416 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.31■□□□□ 0.84
RaraP11416 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RaraP11416 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RaraP11416 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
RaraP11416 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RaraP11416 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RaraP11416 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RaraP11416 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
RaraP11416 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RaraP11416 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RaraP11416 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RaraP11416 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RaraP11416 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.3■□□□□ 0.84
RaraP11416 Grk6-206ENSMUST00000224995 2971 ntBASIC20.3■□□□□ 0.84
RaraP11416 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RaraP11416 Gm6139-201ENSMUST00000079261 882 ntBASIC20.3■□□□□ 0.84
RaraP11416 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
RaraP11416 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.3■□□□□ 0.84
RaraP11416 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.3■□□□□ 0.84
RaraP11416 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RaraP11416 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.29■□□□□ 0.84
RaraP11416 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RaraP11416 Gm12821-201ENSMUST00000120022 600 ntBASIC20.29■□□□□ 0.84
RaraP11416 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
RaraP11416 Rarb-207ENSMUST00000225921 2756 ntBASIC20.29■□□□□ 0.84
RaraP11416 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RaraP11416 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RaraP11416 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RaraP11416 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RaraP11416 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RaraP11416 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RaraP11416 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RaraP11416 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.28■□□□□ 0.84
RaraP11416 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
RaraP11416 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.28■□□□□ 0.84
RaraP11416 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RaraP11416 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.28■□□□□ 0.84
RaraP11416 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RaraP11416 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.28■□□□□ 0.84
RaraP11416 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.28■□□□□ 0.84
RaraP11416 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RaraP11416 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms