Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shoc2O88520 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shoc2O88520 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shoc2O88520 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shoc2O88520 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shoc2O88520 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.42■□□□□ 0.7
Shoc2O88520 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shoc2O88520 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shoc2O88520 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shoc2O88520 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shoc2O88520 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Shoc2O88520 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shoc2O88520 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shoc2O88520 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.41■□□□□ 0.7
Shoc2O88520 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Shoc2O88520 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Shoc2O88520 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.4■□□□□ 0.7
Shoc2O88520 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.4■□□□□ 0.7
Shoc2O88520 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.4■□□□□ 0.7
Shoc2O88520 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.4■□□□□ 0.7
Shoc2O88520 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shoc2O88520 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Shoc2O88520 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.39■□□□□ 0.69
Shoc2O88520 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.39■□□□□ 0.69
Shoc2O88520 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Gm9988-201ENSMUST00000069786 435 ntBASIC19.39■□□□□ 0.69
Shoc2O88520 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shoc2O88520 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shoc2O88520 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.38■□□□□ 0.69
Shoc2O88520 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shoc2O88520 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Shoc2O88520 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shoc2O88520 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Shoc2O88520 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shoc2O88520 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.38■□□□□ 0.69
Shoc2O88520 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.38■□□□□ 0.69
Shoc2O88520 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.38■□□□□ 0.69
Shoc2O88520 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shoc2O88520 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Shoc2O88520 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shoc2O88520 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shoc2O88520 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shoc2O88520 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.37■□□□□ 0.69
Shoc2O88520 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Shoc2O88520 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Shoc2O88520 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Shoc2O88520 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Shoc2O88520 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Shoc2O88520 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shoc2O88520 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Shoc2O88520 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shoc2O88520 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shoc2O88520 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shoc2O88520 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shoc2O88520 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Shoc2O88520 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shoc2O88520 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms