Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc1a6O35544 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc1a6O35544 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc1a6O35544 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc1a6O35544 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Slc1a6O35544 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc1a6O35544 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc1a6O35544 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Slc1a6O35544 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc1a6O35544 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc1a6O35544 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc1a6O35544 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.52■□□□□ 0.56
Slc1a6O35544 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.52■□□□□ 0.56
Slc1a6O35544 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Slc1a6O35544 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.52■□□□□ 0.56
Slc1a6O35544 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc1a6O35544 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc1a6O35544 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.52■□□□□ 0.55
Slc1a6O35544 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc1a6O35544 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Slc1a6O35544 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc1a6O35544 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.51■□□□□ 0.55
Slc1a6O35544 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc1a6O35544 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc1a6O35544 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc1a6O35544 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc1a6O35544 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc1a6O35544 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc1a6O35544 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc1a6O35544 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc1a6O35544 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc1a6O35544 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc1a6O35544 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Slc1a6O35544 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Slc1a6O35544 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.5■□□□□ 0.55
Slc1a6O35544 Golgb1-201ENSMUST00000023534 498 ntBASIC18.5■□□□□ 0.55
Slc1a6O35544 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc1a6O35544 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc1a6O35544 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc1a6O35544 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc1a6O35544 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc1a6O35544 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.49■□□□□ 0.55
Slc1a6O35544 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc1a6O35544 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc1a6O35544 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.49■□□□□ 0.55
Slc1a6O35544 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc1a6O35544 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc1a6O35544 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc1a6O35544 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.48■□□□□ 0.55
Slc1a6O35544 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc1a6O35544 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc1a6O35544 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc1a6O35544 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc1a6O35544 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Slc1a6O35544 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc1a6O35544 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Slc1a6O35544 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc1a6O35544 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Slc1a6O35544 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Slc1a6O35544 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc1a6O35544 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc1a6O35544 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.47■□□□□ 0.55
Slc1a6O35544 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc1a6O35544 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Slc1a6O35544 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc1a6O35544 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc1a6O35544 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.46■□□□□ 0.55
Slc1a6O35544 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Slc1a6O35544 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Slc1a6O35544 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Slc1a6O35544 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
Slc1a6O35544 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc1a6O35544 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Slc1a6O35544 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Slc1a6O35544 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Slc1a6O35544 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.45■□□□□ 0.54
Slc1a6O35544 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms