Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.02■□□□□ 0.48
Polr2jO08740 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr2jO08740 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Polr2jO08740 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.02■□□□□ 0.48
Polr2jO08740 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.02■□□□□ 0.48
Polr2jO08740 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr2jO08740 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr2jO08740 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr2jO08740 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Polr2jO08740 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Polr2jO08740 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Polr2jO08740 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Polr2jO08740 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Polr2jO08740 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Polr2jO08740 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr2jO08740 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Polr2jO08740 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Polr2jO08740 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Polr2jO08740 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr2jO08740 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.01■□□□□ 0.47
Polr2jO08740 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.01■□□□□ 0.47
Polr2jO08740 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.01■□□□□ 0.47
Polr2jO08740 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr2jO08740 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr2jO08740 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr2jO08740 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Polr2jO08740 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr2jO08740 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Polr2jO08740 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr2jO08740 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Polr2jO08740 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Polr2jO08740 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18■□□□□ 0.47
Polr2jO08740 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18■□□□□ 0.47
Polr2jO08740 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Rarb-207ENSMUST00000225921 2756 ntBASIC18■□□□□ 0.47
Polr2jO08740 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18■□□□□ 0.47
Polr2jO08740 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18■□□□□ 0.47
Polr2jO08740 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Gm7856-201ENSMUST00000117514 1493 ntBASIC18■□□□□ 0.47
Polr2jO08740 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Polr2jO08740 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Polr2jO08740 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Polr2jO08740 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Polr2jO08740 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Polr2jO08740 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.98■□□□□ 0.47
Polr2jO08740 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr2jO08740 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr2jO08740 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr2jO08740 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr2jO08740 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr2jO08740 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.97■□□□□ 0.47
Polr2jO08740 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr2jO08740 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.97■□□□□ 0.47
Polr2jO08740 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.97■□□□□ 0.47
Polr2jO08740 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Polr2jO08740 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr2jO08740 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Polr2jO08740 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Polr2jO08740 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms