Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim22J3QP37 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim22J3QP37 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smim22J3QP37 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim22J3QP37 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smim22J3QP37 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.8■□□□□ 0.6
Smim22J3QP37 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smim22J3QP37 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.8■□□□□ 0.6
Smim22J3QP37 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim22J3QP37 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smim22J3QP37 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smim22J3QP37 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim22J3QP37 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.79■□□□□ 0.6
Smim22J3QP37 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.79■□□□□ 0.6
Smim22J3QP37 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smim22J3QP37 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smim22J3QP37 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim22J3QP37 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim22J3QP37 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smim22J3QP37 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim22J3QP37 Gm17807-201ENSMUST00000186869 298 ntBASIC18.78■□□□□ 0.6
Smim22J3QP37 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim22J3QP37 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim22J3QP37 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim22J3QP37 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smim22J3QP37 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim22J3QP37 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim22J3QP37 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim22J3QP37 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Smim22J3QP37 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Smim22J3QP37 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.77■□□□□ 0.6
Smim22J3QP37 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Smim22J3QP37 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.77■□□□□ 0.6
Smim22J3QP37 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim22J3QP37 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smim22J3QP37 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.77■□□□□ 0.6
Smim22J3QP37 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim22J3QP37 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Smim22J3QP37 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smim22J3QP37 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smim22J3QP37 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.76■□□□□ 0.59
Smim22J3QP37 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Gm2399-201ENSMUST00000104944 225 ntBASIC18.76■□□□□ 0.59
Smim22J3QP37 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Smim22J3QP37 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Smim22J3QP37 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smim22J3QP37 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim22J3QP37 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smim22J3QP37 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim22J3QP37 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smim22J3QP37 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.75■□□□□ 0.59
Smim22J3QP37 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.75■□□□□ 0.59
Smim22J3QP37 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim22J3QP37 Gm42545-201ENSMUST00000202755 922 ntBASIC18.75■□□□□ 0.59
Smim22J3QP37 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim22J3QP37 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim22J3QP37 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smim22J3QP37 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim22J3QP37 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim22J3QP37 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.74■□□□□ 0.59
Smim22J3QP37 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim22J3QP37 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smim22J3QP37 Gm43438-201ENSMUST00000198133 379 ntBASIC18.74■□□□□ 0.59
Smim22J3QP37 Gm18669-201ENSMUST00000216049 778 ntBASIC18.74■□□□□ 0.59
Smim22J3QP37 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.74■□□□□ 0.59
Smim22J3QP37 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smim22J3QP37 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.74■□□□□ 0.59
Smim22J3QP37 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim22J3QP37 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.73■□□□□ 0.59
Smim22J3QP37 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim22J3QP37 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smim22J3QP37 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smim22J3QP37 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smim22J3QP37 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim22J3QP37 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim22J3QP37 Gm27704-201ENSMUST00000185094 107 ntBASIC18.72■□□□□ 0.59
Smim22J3QP37 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.72■□□□□ 0.59
Smim22J3QP37 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smim22J3QP37 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim22J3QP37 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smim22J3QP37 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim22J3QP37 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms