Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Gm6139-201ENSMUST00000079261 882 ntBASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh9F8VPK8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh9F8VPK8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh9F8VPK8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh9F8VPK8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdh9F8VPK8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh9F8VPK8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.27■□□□□ 0.67
Pcdh9F8VPK8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh9F8VPK8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh9F8VPK8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh9F8VPK8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh9F8VPK8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh9F8VPK8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh9F8VPK8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh9F8VPK8 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh9F8VPK8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms