Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Rarb-207ENSMUST00000225921 2756 ntBASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-1A0N8R0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-1A0N8R0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Gm12922-201ENSMUST00000120626 809 ntBASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-1A0N8R0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Gm45102-201ENSMUST00000207427 857 ntBASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-1A0N8R0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-1A0N8R0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav12d-1A0N8R0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav12d-1A0N8R0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms