Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Spcs1-204ENSMUST00000226782 949 ntBASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.6■□□□□ 0.09
Trbv29A0A0G2LB96 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv29A0A0G2LB96 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv29A0A0G2LB96 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv29A0A0G2LB96 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv29A0A0G2LB96 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv29A0A0G2LB96 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.58■□□□□ 0.08
Trbv29A0A0G2LB96 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv29A0A0G2LB96 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv29A0A0G2LB96 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv29A0A0G2LB96 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv29A0A0G2LB96 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv29A0A0G2LB96 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trbv29A0A0G2LB96 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv29A0A0G2LB96 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms