Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms