Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv23A0A0A6YWQ1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Trbv23A0A0A6YWQ1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm13241-201ENSMUST00000094493 780 ntBASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv23A0A0A6YWQ1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv23A0A0A6YWQ1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Mir6236-201ENSMUST00000184437 123 ntBASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv23A0A0A6YWQ1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms