Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm17158-201ENSMUST00000168150 493 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 H2-M10.4-202ENSMUST00000169950 996 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm24327-201ENSMUST00000175108 78 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm25947-201ENSMUST00000180343 110 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm4873-201ENSMUST00000199402 1203 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 AC131745.3-201ENSMUST00000223582 554 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Cldn34b1-201ENSMUST00000096852 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm15328-204ENSMUST00000210330 1518 ntTSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm17259-201ENSMUST00000181520 4608 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Gm28229-201ENSMUST00000188747 2153 ntBASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Nup88Q8CEC0 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Rorc-202ENSMUST00000197040 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 AC100590.1-201ENSMUST00000220318 1357 ntTSL 5 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 2010109I03Rik-201ENSMUST00000077004 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Olfr381-203ENSMUST00000214623 2656 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Obp2b-201ENSMUST00000114192 732 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm14427-201ENSMUST00000117183 635 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm11241-201ENSMUST00000117371 896 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm15220-201ENSMUST00000120730 379 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm11765-201ENSMUST00000121173 1205 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm26436-201ENSMUST00000180325 132 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm7631-201ENSMUST00000196935 1100 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Gm6312-201ENSMUST00000204060 1194 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 AC134254.3-201ENSMUST00000223533 575 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 AC123867.1-201ENSMUST00000224990 816 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Sdr42e1-202ENSMUST00000173522 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup88Q8CEC0 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm23192-201ENSMUST00000102434 96 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm25501-201ENSMUST00000104429 132 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm14336-201ENSMUST00000117491 475 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm14542-201ENSMUST00000118460 1248 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm12361-201ENSMUST00000119806 1044 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm15009-201ENSMUST00000121387 322 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm10086-201ENSMUST00000136334 354 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Sh2d1a-207ENSMUST00000189753 1223 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm8010-201ENSMUST00000194128 873 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm42654-201ENSMUST00000200789 494 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Olfr1396-203ENSMUST00000203007 981 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 BC060293-201ENSMUST00000207005 1104 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm3854-201ENSMUST00000207173 2950 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 AC137117.3-201ENSMUST00000226265 485 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 AC166574.2-201ENSMUST00000226751 381 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Olfr214-201ENSMUST00000060204 1008 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 5330417H12Rik-201ENSMUST00000060348 1191 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm10335-201ENSMUST00000096020 468 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm10132-201ENSMUST00000099431 468 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm37069-201ENSMUST00000192742 4142 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms