Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm44746-201ENSMUST00000205565 1349 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm13360-201ENSMUST00000121607 799 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm14143-201ENSMUST00000121686 357 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm15849-201ENSMUST00000159257 335 ntTSL 3 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm8257-203ENSMUST00000179215 489 ntTSL 5 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm28419-201ENSMUST00000189108 475 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 AC211878.7-201ENSMUST00000222851 661 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 AC163038.3-201ENSMUST00000223945 558 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 AC154747.2-201ENSMUST00000225109 780 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm35172-201ENSMUST00000196037 2649 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Klrb1b-202ENSMUST00000172887 1416 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 AC154738.6-201ENSMUST00000227225 1352 ntBASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Btbd11-202ENSMUST00000105306 3945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup88Q8CEC0 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Olfr155-202ENSMUST00000107860 3480 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm37465-201ENSMUST00000192845 3290 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 AC117656.3-203ENSMUST00000225007 1809 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Pde4b-202ENSMUST00000097949 2465 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm13243-201ENSMUST00000117481 565 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm13240-201ENSMUST00000120042 565 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm25767-201ENSMUST00000158572 124 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm23823-201ENSMUST00000158740 124 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Pabpn1-208ENSMUST00000172557 700 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Ube2i-212ENSMUST00000174001 623 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm25082-201ENSMUST00000177296 255 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm28361-201ENSMUST00000188825 474 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Mir124-2hg-205ENSMUST00000189467 173 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm8521-201ENSMUST00000190394 606 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm45877-201ENSMUST00000212110 564 ntTSL 3 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 AC163638.1-201ENSMUST00000224818 392 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm10260-201ENSMUST00000074072 561 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm4275-205ENSMUST00000212624 1436 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup88Q8CEC0 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 L3mbtl3-202ENSMUST00000105519 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup88Q8CEC0 Gm16465-201ENSMUST00000118585 1758 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms