Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.43■□□□□ 0.54
Cdh17Q9R100 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Gm27801-201ENSMUST00000184174 223 ntBASIC18.42■□□□□ 0.54
Cdh17Q9R100 Gm8493-201ENSMUST00000196881 489 ntBASIC18.42■□□□□ 0.54
Cdh17Q9R100 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh17Q9R100 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdh17Q9R100 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh17Q9R100 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Cdh17Q9R100 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdh17Q9R100 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.39■□□□□ 0.53
Cdh17Q9R100 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh17Q9R100 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cdh17Q9R100 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh17Q9R100 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh17Q9R100 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cdh17Q9R100 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Gm27454-201ENSMUST00000185090 204 ntBASIC18.36■□□□□ 0.53
Cdh17Q9R100 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.36■□□□□ 0.53
Cdh17Q9R100 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh17Q9R100 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms