Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.3
Sec61a2Q9JLR1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sec61a2Q9JLR1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a2Q9JLR1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a2Q9JLR1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a2Q9JLR1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a2Q9JLR1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Sec61a2Q9JLR1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Gm43060-201ENSMUST00000200621 289 ntBASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a2Q9JLR1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sec61a2Q9JLR1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Sec61a2Q9JLR1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sec61a2Q9JLR1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms