Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nrip3Q9JJR9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrip3Q9JJR9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrip3Q9JJR9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Nrip3Q9JJR9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrip3Q9JJR9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nrip3Q9JJR9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrip3Q9JJR9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Nrip3Q9JJR9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nrip3Q9JJR9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Nrip3Q9JJR9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nrip3Q9JJR9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nrip3Q9JJR9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nrip3Q9JJR9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Nrip3Q9JJR9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nrip3Q9JJR9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nrip3Q9JJR9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms