Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Rpf2Q9JJ80 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpf2Q9JJ80 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpf2Q9JJ80 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.09■□□□□ 0.81
Rpf2Q9JJ80 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rpf2Q9JJ80 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpf2Q9JJ80 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rpf2Q9JJ80 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpf2Q9JJ80 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpf2Q9JJ80 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.08■□□□□ 0.8
Rpf2Q9JJ80 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpf2Q9JJ80 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpf2Q9JJ80 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpf2Q9JJ80 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpf2Q9JJ80 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpf2Q9JJ80 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpf2Q9JJ80 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Spcs1-204ENSMUST00000226782 949 ntBASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpf2Q9JJ80 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpf2Q9JJ80 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpf2Q9JJ80 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpf2Q9JJ80 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpf2Q9JJ80 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpf2Q9JJ80 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Rpf2Q9JJ80 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpf2Q9JJ80 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpf2Q9JJ80 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpf2Q9JJ80 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpf2Q9JJ80 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpf2Q9JJ80 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpf2Q9JJ80 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpf2Q9JJ80 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.01■□□□□ 0.79
Rpf2Q9JJ80 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpf2Q9JJ80 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms