Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Barx1Q9ER42 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Barx1Q9ER42 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Barx1Q9ER42 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Barx1Q9ER42 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Barx1Q9ER42 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Barx1Q9ER42 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Barx1Q9ER42 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Barx1Q9ER42 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Barx1Q9ER42 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Barx1Q9ER42 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Barx1Q9ER42 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Barx1Q9ER42 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.02■□□□□ 0.31
Barx1Q9ER42 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Barx1Q9ER42 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.01■□□□□ 0.31
Barx1Q9ER42 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Barx1Q9ER42 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Barx1Q9ER42 Gm12504-201ENSMUST00000120860 2231 ntBASIC17■□□□□ 0.31
Barx1Q9ER42 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Barx1Q9ER42 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Barx1Q9ER42 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Barx1Q9ER42 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Barx1Q9ER42 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Barx1Q9ER42 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17■□□□□ 0.31
Barx1Q9ER42 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17■□□□□ 0.31
Barx1Q9ER42 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17■□□□□ 0.31
Barx1Q9ER42 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Barx1Q9ER42 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Barx1Q9ER42 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Barx1Q9ER42 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Gm18666-201ENSMUST00000190039 958 ntBASIC16.98■□□□□ 0.31
Barx1Q9ER42 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.98■□□□□ 0.31
Barx1Q9ER42 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.98■□□□□ 0.31
Barx1Q9ER42 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.98■□□□□ 0.31
Barx1Q9ER42 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.98■□□□□ 0.31
Barx1Q9ER42 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Barx1Q9ER42 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.97■□□□□ 0.31
Barx1Q9ER42 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Barx1Q9ER42 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms