Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Gm11249-201ENSMUST00000117071 859 ntBASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx29Q9D3S3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.84■□□□□ 0.93
Snx29Q9D3S3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.83■□□□□ 0.93
Snx29Q9D3S3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Snx29Q9D3S3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snx29Q9D3S3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snx29Q9D3S3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snx29Q9D3S3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snx29Q9D3S3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Mir6982-201ENSMUST00000184354 68 ntBASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Mir7071-201ENSMUST00000184847 69 ntBASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx29Q9D3S3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Snx29Q9D3S3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Snx29Q9D3S3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Snx29Q9D3S3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Snx29Q9D3S3 Gm6576-201ENSMUST00000169678 883 ntBASIC20.81■□□□□ 0.92
Snx29Q9D3S3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.81■□□□□ 0.92
Snx29Q9D3S3 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.81■□□□□ 0.92
Snx29Q9D3S3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.81■□□□□ 0.92
Snx29Q9D3S3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Snx29Q9D3S3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Snx29Q9D3S3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Gm2399-201ENSMUST00000104944 225 ntBASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Snx29Q9D3S3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx29Q9D3S3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Snx29Q9D3S3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx29Q9D3S3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx29Q9D3S3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Snx29Q9D3S3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx29Q9D3S3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Snx29Q9D3S3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx29Q9D3S3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms