Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.78■□□□□ 0.6
Homer3Q99JP6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Homer3Q99JP6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Homer3Q99JP6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Homer3Q99JP6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Homer3Q99JP6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Homer3Q99JP6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Homer3Q99JP6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Homer3Q99JP6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Homer3Q99JP6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Homer3Q99JP6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Homer3Q99JP6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Homer3Q99JP6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.77■□□□□ 0.59
Homer3Q99JP6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Homer3Q99JP6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
Homer3Q99JP6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Homer3Q99JP6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Homer3Q99JP6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Homer3Q99JP6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Homer3Q99JP6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Homer3Q99JP6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.75■□□□□ 0.59
Homer3Q99JP6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Homer3Q99JP6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.75■□□□□ 0.59
Homer3Q99JP6 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.75■□□□□ 0.59
Homer3Q99JP6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.75■□□□□ 0.59
Homer3Q99JP6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Homer3Q99JP6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Homer3Q99JP6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.74■□□□□ 0.59
Homer3Q99JP6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Homer3Q99JP6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.73■□□□□ 0.59
Homer3Q99JP6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.73■□□□□ 0.59
Homer3Q99JP6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.73■□□□□ 0.59
Homer3Q99JP6 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.73■□□□□ 0.59
Homer3Q99JP6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Homer3Q99JP6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms