Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm10602-201ENSMUST00000098239 609 ntBASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Gm38116-201ENSMUST00000193873 1533 ntBASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Gm37744-201ENSMUST00000194616 1590 ntBASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 Gm29257-201ENSMUST00000186115 639 ntBASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb20Q91XZ9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb20Q91XZ9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb20Q91XZ9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb20Q91XZ9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb20Q91XZ9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb20Q91XZ9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhb20Q91XZ9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb20Q91XZ9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhb20Q91XZ9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.08■□□□□ 0.48
Pcdhb20Q91XZ9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb20Q91XZ9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb20Q91XZ9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.08■□□□□ 0.48
Pcdhb20Q91XZ9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb20Q91XZ9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb20Q91XZ9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb20Q91XZ9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb20Q91XZ9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms