Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga4Q91XY4 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga4Q91XY4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Gm10849-201ENSMUST00000100397 618 ntBASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Gm13234-201ENSMUST00000120010 747 ntBASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Gm10033-202ENSMUST00000211874 928 ntBASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga4Q91XY4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga4Q91XY4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhga4Q91XY4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga4Q91XY4 AV356131-201ENSMUST00000206201 750 ntBASIC18.48■□□□□ 0.55
Pcdhga4Q91XY4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga4Q91XY4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga4Q91XY4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhga4Q91XY4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga4Q91XY4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Gm27405-201ENSMUST00000184201 112 ntBASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga4Q91XY4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.46■□□□□ 0.55
Pcdhga4Q91XY4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhga4Q91XY4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Pcdhga4Q91XY4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Gm7291-201ENSMUST00000199147 382 ntBASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga4Q91XY4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga4Q91XY4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga4Q91XY4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhga4Q91XY4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms