Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.7■□□□□ 0.58
Vsx1Q91V10 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.7■□□□□ 0.58
Vsx1Q91V10 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.7■□□□□ 0.58
Vsx1Q91V10 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx1Q91V10 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vsx1Q91V10 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.69■□□□□ 0.58
Vsx1Q91V10 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Golph3-202ENSMUST00000226517 2359 ntBASIC18.69■□□□□ 0.58
Vsx1Q91V10 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.69■□□□□ 0.58
Vsx1Q91V10 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx1Q91V10 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vsx1Q91V10 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.67■□□□□ 0.58
Vsx1Q91V10 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vsx1Q91V10 Iqck-206ENSMUST00000208658 2891 ntBASIC18.67■□□□□ 0.58
Vsx1Q91V10 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Vsx1Q91V10 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vsx1Q91V10 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.67■□□□□ 0.58
Vsx1Q91V10 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vsx1Q91V10 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vsx1Q91V10 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx1Q91V10 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx1Q91V10 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx1Q91V10 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.66■□□□□ 0.58
Vsx1Q91V10 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Vsx1Q91V10 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx1Q91V10 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx1Q91V10 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vsx1Q91V10 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Gm11643-201ENSMUST00000119578 864 ntBASIC18.64■□□□□ 0.57
Vsx1Q91V10 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Gm37055-201ENSMUST00000191866 133 ntBASIC18.64■□□□□ 0.57
Vsx1Q91V10 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx1Q91V10 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Vsx1Q91V10 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Gm10698-201ENSMUST00000182663 604 ntBASIC18.63■□□□□ 0.57
Vsx1Q91V10 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms