Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Gm10459-201ENSMUST00000202708 1155 ntBASIC22.98■■□□□ 1.27
StrcQ8VIM6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Gm7889-201ENSMUST00000185591 958 ntBASIC22.98■■□□□ 1.27
StrcQ8VIM6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.98■■□□□ 1.27
StrcQ8VIM6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.98■■□□□ 1.27
StrcQ8VIM6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
StrcQ8VIM6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
StrcQ8VIM6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.96■■□□□ 1.27
StrcQ8VIM6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC22.96■■□□□ 1.27
StrcQ8VIM6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
StrcQ8VIM6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
StrcQ8VIM6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
StrcQ8VIM6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
StrcQ8VIM6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC22.96■■□□□ 1.27
StrcQ8VIM6 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.95■■□□□ 1.26
StrcQ8VIM6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
StrcQ8VIM6 Gm3375-201ENSMUST00000203929 796 ntBASIC22.95■■□□□ 1.26
StrcQ8VIM6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
StrcQ8VIM6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
StrcQ8VIM6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
StrcQ8VIM6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
StrcQ8VIM6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
StrcQ8VIM6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
StrcQ8VIM6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.93■■□□□ 1.26
StrcQ8VIM6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
StrcQ8VIM6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
StrcQ8VIM6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
StrcQ8VIM6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
StrcQ8VIM6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
StrcQ8VIM6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
StrcQ8VIM6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Gm6659-201ENSMUST00000174752 547 ntBASIC22.92■■□□□ 1.26
StrcQ8VIM6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
StrcQ8VIM6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.91■■□□□ 1.26
StrcQ8VIM6 Gm11539-201ENSMUST00000119837 557 ntBASIC22.91■■□□□ 1.26
StrcQ8VIM6 Gm13436-201ENSMUST00000120418 567 ntBASIC22.91■■□□□ 1.26
StrcQ8VIM6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Gm7367-201ENSMUST00000057611 492 ntBASIC22.91■■□□□ 1.26
StrcQ8VIM6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
StrcQ8VIM6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
StrcQ8VIM6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
StrcQ8VIM6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
StrcQ8VIM6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
StrcQ8VIM6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
StrcQ8VIM6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
StrcQ8VIM6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
StrcQ8VIM6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
StrcQ8VIM6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
StrcQ8VIM6 Gm30025-201ENSMUST00000218555 728 ntBASIC22.89■■□□□ 1.26
StrcQ8VIM6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
StrcQ8VIM6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms